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gatk-3.8/public/java/test/org/broadinstitute/sting/utils/sam
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Mauricio Carneiro 705cccaf63 Making SplitReads output FastQ's instead of BAM 
- eliminates one step in my pipeline
   - BAM is too finicky and maintaining parameters that wouldn't be useful was becoming a headache, better avoided.
 		2013-01-27 02:36:31 -05:00
..
AlignmentUtilsUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ArtificialBAMBuilderUnitTest.java Last manual license update (hopefully) 2013-01-18 16:13:07 -05:00
ArtificialPatternedSAMIteratorUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ArtificialSAMFileWriterUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ArtificialSAMQueryIteratorUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ArtificialSAMUtilsUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ArtificialSingleSampleReadStreamUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
GATKSAMRecordUnitTest.java PileupElement and LIBS cleanup 2013-01-11 15:17:17 -05:00
MisencodedBaseQualityUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
ReadUtilsUnitTest.java Making SplitReads output FastQ's instead of BAM 2013-01-27 02:36:31 -05:00