hanna f55f32d4ee Bug fix. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3526 348d0f76-0448-11de-a6fe-93d51630548a		2010-06-10 01:53:26 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Bug fix.	2010-06-10 01:53:26 +00:00
test/org/broadinstitute/sting	Now annotations that require reads return null if there's no alignment context, so that running without reads adds annotations only for the appropriate fields.	2010-06-09 20:36:46 +00:00