carneiro ccdc021207 Added BWA (option) to the data processing pipeline. Lots of testing still happening... ... little fix to the calling pipeline. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5528 348d0f76-0448-11de-a6fe-93d51630548a		2011-03-28 20:17:57 +00:00
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qscript	Added BWA (option) to the data processing pipeline. Lots of testing still happening...	2011-03-28 20:17:57 +00:00
src/org/broadinstitute/sting	When host name lookup fails just use the whole internet address instead of truncating to the last two octets of the IP address.	2011-03-25 18:18:22 +00:00
test/org/broadinstitute/sting/queue	Enabled the parameterize option for debugging PipelineTest MD5s.	2011-03-26 00:41:47 +00:00