gatk-3.8/testdata/recalConfig_1KG.cfg

11 lines
332 B
INI

[DEFAULT]
resources: resources
#dbsnp: %(resources)s/dbsnp_129_hg18.rod
dbsnp: %(resources)s/dbsnp_129_b36.rod
[R]
Rscript: /broad/tools/apps/R-2.6.0/bin/Rscript
PlotQEmpStated: %(resources)s/plot_q_emp_stated_hst.R
PlotQDiffByCycle: %(resources)s/plot_qual_diff_v_cycle.R
PlotQDiffByDinuc: %(resources)s/plot_qual_diff_v_dinuc.R