gatk-3.8/scala/qscript/chartl
chartl f36861eeee One more little bfix -- the issue was not the grep command, but instead the NFS in the awk; i changed it to ++count in the last commit which was really responsible for the fix. Then this ultra-escaping semi-broke teh grep again.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4831 348d0f76-0448-11de-a6fe-93d51630548a
2010-12-13 20:36:14 +00:00
..
old Restructuring my qscripts 2010-12-11 20:58:45 +00:00
RefineGenotypesAndMerge.q Commit for Ryan 2010-10-05 19:04:10 +00:00
batchMergePipeline.q Tightening of the batch merging pipeline. Optimized to run on hour queue, so please: if you run this, crush 'hour' with it. Testing is forthcoming, but it merged 700 samples overnight. 2010-12-08 14:36:23 +00:00
fullCallingPipelineV2.q java changes: 2010-12-12 05:10:45 +00:00
omni_qc.q Bug fix to GenotypeConcordance. AC metrics get instantiated based on number of eval samples; if Comp has more samples, we can see AC indeces outside the bounds of the array. 2010-11-03 19:23:03 +00:00
private_mutations.q One more little bfix -- the issue was not the grep command, but instead the NFS in the awk; i changed it to ++count in the last commit which was really responsible for the fix. Then this ultra-escaping semi-broke teh grep again. 2010-12-13 20:36:14 +00:00