gatk3的最后一个经典版本3.8

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Ryan Poplin f058224b3e Adding GenotypeSummaries as INFO field annotations. -- This is needed so the ref model pipeline can cut down to sites-only files without losing these useful statistics. -- Added new unit test to test this info field annotation. -- GenotypeGVCF integration tests change because new annotations are present in the output		2014-04-06 11:50:10 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Adding GenotypeSummaries as INFO field annotations.	2014-04-06 11:50:10 -04:00
public	Merge pull request #587 from broadinstitute/eb_actually_fail_on_reduced_bams	2014-04-04 17:27:57 -04:00
settings/helpTemplates	Replaced local drmaa and Jama artifacts with versions from maven central.	2014-02-22 01:21:35 +08:00
.gitignore	Fixed bug using GraphBased due to infinite likelihoods resulting from the calculation of alignment cost of very long insertion or deletions (done in linear scale)	2014-04-01 16:14:52 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Rename existing PipelineTests to QueueTests to prepare for upcoming push of new pipeline tests	2014-03-10 21:24:03 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Update pom versions to mark the start of GATK 3.2 development	2014-03-18 01:18:59 -04:00

README.md

The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/