ebanks 2b96b2e4e7 better multi-sample integration test ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1933 348d0f76-0448-11de-a6fe-93d51630548a		2009-10-29 13:51:51 +00:00
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gatk	better multi-sample integration test	2009-10-29 13:51:51 +00:00
playground/gatk/walkers	Reverting rod walkers to use underlying refwalker implementation while we work on ROD2 and reenable the system. Added some serious sparse file parsing to variant eval tests	2009-10-29 01:04:37 +00:00
utils	now that the design is stable, pull the setReference and setLocation methods back out of Genotype and stick them into constructors of implementing classes	2009-10-29 13:27:37 +00:00
BaseTest.java	Added some code to change the instrumentation for tests.	2009-05-20 05:15:27 +00:00
TrivialInstrumenter.java	fixed a bunch of comments and license headers.	2009-06-10 14:10:46 +00:00
WalkerTest.java	Enabling correct high-performance ROD walker and moved VariantEval over to it. Performance improvements in variantEval in general. See wiki for full description	2009-10-20 23:31:13 +00:00