Khalid Shakir f049461120 Changed @Argument to @Input on input RodBindings. ... Changed shortname collision with longname. Restored scala builds. Updated HSP to use new syntax.		2011-08-06 20:44:19 -04:00
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R	GATKReport v0.2:	2011-08-03 00:24:47 -04:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Changed @Argument to @Input on input RodBindings.	2011-08-06 20:44:19 -04:00
packages	Added edu.mit.broad.picard to Queue packaged jar.	2011-07-23 14:40:29 -04:00
perl	Moving these supported perl scripts to public	2011-07-01 17:26:25 -04:00
scala	Merge	2011-08-03 15:09:47 -04:00
testdata	Testdata for diffObjects.	2011-07-18 10:47:03 -04:00