gatk3的最后一个经典版本3.8

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Mauricio Carneiro efbfdb64fe Qscript to Downsample and analyze an exome BAM this script downsamples an exome BAM several times and makes a coverage distribution analysis (of bases that pass filters) as well as haplotype caller calls with a NA12878 Knowledge Base assessment with comparison against multi-sample calling with the UG. This script was used for the "downsampling the exome" presentation		2013-10-10 14:37:33 -04:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Merged bug fix from Stable into Unstable	2013-10-10 14:31:33 -04:00
public	Qscript to Downsample and analyze an exome BAM	2013-10-10 14:37:33 -04:00
settings	Modify gatkdoc template to handle downsampling info better	2013-09-26 14:50:32 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit