gatk3的最后一个经典版本3.8

Mark DePristo efad215edb Greedy version of function to compute the max achievable AC for each alt allele ... -- walks over the genotypes in VC, and computes for each alt allele the maximum AC we need to consider in that alt allele dimension. Does the calculation based on the PLs in each genotype g, choosing to update the max AC for the alt alleles corresponding to that PL. Only takes the first lowest PL, if there are multiple genotype configurations with the same PL value. It takes values in the order of the alt alleles.		2012-10-15 07:53:54 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Greedy version of function to compute the max achievable AC for each alt allele	2012-10-15 07:53:54 -04:00
public	Greedy version of function to compute the max achievable AC for each alt allele	2012-10-15 07:53:54 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00