Eric Banks ef87b18e09 In retrospect, it wasn't a good idea to have FisherStrand handle reduced reads since they are always on the forward strand. For now, FS ignores reduced reads but I've added a note (and JIRA) to make this work once the RR het compression is enabled (since we will have directionality in reads then).		2012-12-05 02:00:35 -05:00
..
src/org/broadinstitute/sting	misc minor bug fixes to GenotypingEngine.	2012-12-03 12:47:35 -05:00
test/org/broadinstitute/sting	In retrospect, it wasn't a good idea to have FisherStrand handle reduced reads since they are always on the forward strand. For now, FS ignores reduced reads but I've added a note (and JIRA) to make this work once the RR het compression is enabled (since we will have directionality in reads then).	2012-12-05 02:00:35 -05:00