Khalid Shakir ef50e77ee2 When running Queue jobs locally, merge the stderr to the stdout log if the error file is NOT specified. ... Updated VE strats in the HSP for plotting Ka/Ks by AC.		2012-01-10 16:10:25 -05:00
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R	Protect ourselves when iteration is present but there's only a single iteration in queueJobReport.R	2011-12-19 10:08:38 -05:00
c	Reinitialize random seed in the bwa bindings from the fixed seed stored in the	2011-07-22 13:41:53 -04:00
chainFiles	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
doc	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
java	Eliminate unnecessary strong references (and therefore memory held) by tree reduce entries that have already been processed.	2012-01-09 23:04:53 -05:00
packages	Revved Picard to incorporate tfennell's AsyncSAMFileWriter.	2011-12-06 10:37:42 -05:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	When running Queue jobs locally, merge the stderr to the stdout log if the error file is NOT specified.	2012-01-10 16:10:25 -05:00
testdata	Data Processing Pipeline Test	2011-12-12 00:24:51 -05:00