gatk-3.8/java
hanna ee9077fc69 LocusIterator iterated through LocusContexts, which was fine until now when we need something
that iterates through loci (GenomeLocs).  Rename LocusIterator to LocusContextIterator.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@662 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-12 13:54:57 +00:00
..
config Provide a default logger, some config settings, and some doc updates. 2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting LocusIterator iterated through LocusContexts, which was fine until now when we need something 2009-05-12 13:54:57 +00:00
test/org/broadinstitute/sting intervals_file + genome_loc => intervals. 2009-05-12 01:04:18 +00:00