gatk-3.8/java/test/org/broadinstitute/sting/gatk
ebanks 9c7b281b4f Set default value for max_coverage to be 100K (since 10K is too small).
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2646 348d0f76-0448-11de-a6fe-93d51630548a
2010-01-20 20:15:25 +00:00
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arguments Looks bigger than it is: 2010-01-15 00:14:35 +00:00
datasources First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
executive Added IterableLocusContextQueue and test. Cleaned up tests, adding BaseTest where it didn't exist. Enhanced test runner to run only classes ending in ...Test.java, so that utility classes can sit alongside the tests but won't be run by JUnit. 2009-05-13 21:32:05 +00:00
io Fix for problem where err stream remapped to output stream in certain cases, (hopefully) completing Matt's hat trick of fail. Thanks, unit tests. 2009-09-16 08:33:56 +00:00
iterators changes to intelligently log overflowing locus pile-ups. 2010-01-20 08:09:48 +00:00
refdata moved hard-coded file paths to the oneKGLocation, validationDataLocation, and seqLocation variables setup in the BaseTest. 2009-12-29 07:40:48 +00:00
traversals First successful test of new sharding system prototype. Can traverse over reads from a single 2010-01-15 03:35:55 +00:00
walkers Set default value for max_coverage to be 100K (since 10K is too small). 2010-01-20 20:15:25 +00:00