gatk-3.8/public/scala/src/org/broadinstitute/sting/queue
Khalid Shakir f66284658d RetryMemoryLimit now works with Scatter/Gather. 2012-10-09 21:51:03 -04:00
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engine Complete GSA-497: Let Queue write out runInfo on the fly, after each job group finishes running 2012-08-21 14:44:18 -04:00
extensions RetryMemoryLimit now works with Scatter/Gather. 2012-10-09 21:51:03 -04:00
function RetryMemoryLimit now works with Scatter/Gather. 2012-10-09 21:51:03 -04:00
library Fix edge case for very small VCFs 2012-01-19 00:51:28 -05:00
util Complete GSA-497: Let Queue write out runInfo on the fly, after each job group finishes running 2012-08-21 14:44:18 -04:00
QCommandLine.scala Probably the GATK's most seen typo in the world 2012-10-02 13:34:37 -04:00
QException.scala Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
QScript.scala No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice. 2012-01-08 12:11:55 -05:00
QScriptManager.scala No more "Q-<pid>@<host>". Generated log file names now use the first output + ".out" (ex. my.vcf.out) or the name of the first QScript plus the order the function was added (ex. MyScript-1.out). The same function added twice with the same outputs will now have the same default logs, meaning the 2nd instance of the function won't be added to the graph twice. 2012-01-08 12:11:55 -05:00
QSettings.scala Changed the default memory limit from none to 2GB upon suggestions from delangel, carneiro, and depristo. 2012-08-20 21:41:13 -04:00