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jmaguire dd408a2a9a First draft of actual pooled EM caller. 
Produces sane looking output on region of 1kG pilot1:

    CALL NA12813.SRP000031.2009_02.bam CC 0.609084 0.609084
    CALL NA12003.SRP000031.2009_02.bam CC 2.114234 2.114234 CCCCC
    CALL NA06994.SRP000031.2009_02.bam CC 0.910114 0.910114 C
    CALL NA18940.SRP000031.2009_02.bam CT 2.589749 0.910114 T
    CALL NA18555.SRP000031.2009_02.bam CC 0.609084 0.609084

Next up, eval vs. Baseline pilot1 calls and pilot3 deep-coverage truth.



git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@525 348d0f76-0448-11de-a6fe-93d51630548a
 		2009-04-24 13:42:15 +00:00
..
repository First draft of actual pooled EM caller. 2009-04-24 13:42:15 +00:00
ivysettings.properties Moved build.xml, ivy.xml and settings to root of Sting repository. 2009-03-18 19:13:19 +00:00
ivysettings.xml Moved build.xml, ivy.xml and settings to root of Sting repository. 2009-03-18 19:13:19 +00:00