ebanks ee18c9b0c2 Temporary commit to please those in 320: re-support the -knownsOnly argument (@Hidden). This will be reverted in a sec. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@6018 348d0f76-0448-11de-a6fe-93d51630548a		2011-06-20 16:28:58 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Temporary commit to please those in 320: re-support the -knownsOnly argument (@Hidden). This will be reverted in a sec.	2011-06-20 16:28:58 +00:00
test	Added stratification by discrete allele count, just like AF, but requiring genotypes so it can be exact. Added docs on wiki, and integrationtest using Kiran's very nice fundamental VCF	2011-06-19 03:11:00 +00:00