gatk-3.8/shell
depristo 0e089ce0b7 watch -n 30 shell/pipelineJobs.csh for those who want to watch the gsaadm's jobs progress
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4966 348d0f76-0448-11de-a6fe-93d51630548a
2011-01-09 13:09:30 +00:00
..
TraverseTest.sh Move non-java code out of playground. 2009-03-23 19:31:38 +00:00
TraverseTestProf.sh Move non-java code out of playground. 2009-03-23 19:31:38 +00:00
getFirehosePipelineYaml.sh Inprocess functions by default now log what output files they are running for. 2010-10-07 19:08:02 +00:00
pipelineJobs.csh watch -n 30 shell/pipelineJobs.csh for those who want to watch the gsaadm's jobs progress 2011-01-09 13:09:30 +00:00
queueStatus.csh Better queue status messages 2010-12-22 20:17:28 +00:00
runGATKReport.csh no longer prints unnecessary table conversion failures that muck up emails. Run script now uses du not ls to display archive size 2011-01-02 13:27:37 +00:00
runbeagle.sh a) Add input argument (-ncrate) to BeagleOutputToVCFWalker. If the genotype posterior error probability is higher than this threshold, we declare No-call at this genotype. 2010-07-06 18:33:28 +00:00
syncWithDevOnGSA2.csh Deleting old shell code 2011-01-07 21:36:16 +00:00