gatk3的最后一个经典版本3.8

David Roazen ed4f19d79b Restore scala compilation by default in build.xml ... -This was accidentally clobbered in a recent commit. -If you want to compile Java-only, easiest thing to do is run "ant gatk" rather than modifying build.xml		2013-05-31 11:28:29 -04:00
licensing	Removing the symlink from the private license file	2013-02-09 12:57:44 -05:00
protected	Create a new normalDistributionLog10 function that is unit tested for use in the VQSR.	2013-05-30 16:00:08 -04:00
public	Three squashed commits:	2013-05-31 00:26:50 -04:00
settings	Rev picard, sam-jdk, tribble, and variant to version 1.91.1453	2013-05-07 14:21:15 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
build.xml	Restore scala compilation by default in build.xml	2013-05-31 11:28:29 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Brought all of ReduceReads to fastutils	2013-02-23 22:53:23 -05:00