d1febb89c8
* add overall walker GATKDocs * add explanation for skip parameter and make it advanced * reverse the logic on exculding unmapped reads for clarity * fix read length calculation to no longer include indels ps: I am not sure how useful this walker is (I didn't write it) but the skip logic is poor and calculates the entire statistic for the reads it is eventually going to skip. This would be an easy fix, but only worth our time if people actually use this. |
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