hanna 43c3ee61d5 Fix minor mapping quality bug. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1973 348d0f76-0448-11de-a6fe-93d51630548a		2009-11-04 14:33:23 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Fix minor mapping quality bug.	2009-11-04 14:33:23 +00:00
test/org/broadinstitute/sting	No longer allow the lod_threshold argument - use confidence instead.	2009-11-03 16:18:51 +00:00