Mauricio Carneiro ec9920b04f Updating the SAM TAG for Original Alignment Start to "OP" ... per Mark's recommendation to reuse the Indel Realigner tag that made it to the SAM spec. The Alignment end tag is still "OE" as there is no official tag to reuse.		2012-01-27 08:51:39 -05:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Updating the SAM TAG for Original Alignment Start to "OP"	2012-01-27 08:51:39 -05:00
test	embarrassing fix-up, thanks Khalid.	2012-01-26 19:58:42 -05:00