gatk3的最后一个经典版本3.8

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Eric Banks eb463b505d Remove a whole bunch of unused annotations from gVCF output. AC,AF,AN,FS,QD - they'll all be recomputed later. BLOCK_SIZE and MIN_GQ were not necessary. I also made the StrandBiasBySample annotation forced on when in gVCF mode. It turns out that its output wasn't compatible with BCF so I patched it (and the variant jar too).		2014-02-07 08:49:36 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Remove a whole bunch of unused annotations from gVCF output.	2014-02-07 08:49:36 -05:00
public	Implementation of a hierarchical merger for gVCFs, called CombineGVCFs.	2014-02-07 08:49:18 -05:00
settings	Switched commited dependency repository from ivy to maven.	2014-02-03 13:50:46 -05:00
.gitignore	Rev Picard (public) to 1.107.1676	2014-02-04 22:04:28 -05:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
ant-bridge.sh	Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.	2014-02-06 08:25:38 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
pom.xml	Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.	2014-02-06 08:25:38 -05:00

The Genome Analysis Toolkit