David Roazen 42d771f748 Remove org.apache.commons.collections.IteratorUtils dependency from the test suite ... -This was a dependency of the test suite, but not the GATK proper, which caused problems when running the test suite on the packaged GATK jar at release time -Use GATKVCFUtils.readVCF() instead		2013-08-21 19:44:02 -04:00
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R	Something changed with the ggtitle syntax in the latest version of ggplot2.	2013-08-14 14:40:03 -04:00
c	…
chainFiles	…
doc	Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)	2013-03-12 10:57:14 -04:00
java	Remove org.apache.commons.collections.IteratorUtils dependency from the test suite	2013-08-21 19:44:02 -04:00
keys	…
packages	ValidatingPileup was renamed to CheckPileup	2013-02-15 11:56:19 -05:00
perl	…
scala	Merge pull request #379 from broadinstitute/mc_dpp_updates_part2	2013-08-19 18:42:12 -07:00
testdata	Walker to create a fastq file from an interval list	2013-06-29 11:24:16 -04:00