Mark DePristo e9c22b9aad Final updates to integration tests for BCF2 ... -- Fully working version -- Use -generateShadowBCF to write out foo.bcf as well as foo.vcf anywhere you use -o foo.vcf -- Moved MedianUnitTest to its proper home in Utils -- Added reportng to ivy and testng, so build/report/X/html/ is a nicely formatted output for Unit and Integration tests. From this website it's easy to see md5 diffs, etc. This is a vastly better way to manage unit and integration test output		2012-05-24 10:58:59 -04:00
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net/sf	GATK tests use public/testdata not /humgen/ as much as possible	2012-05-24 10:58:58 -04:00
org/broadinstitute/sting	Final updates to integration tests for BCF2	2012-05-24 10:58:59 -04:00