Johan Dahlberg e9b9e2318c Fixed SortSam bug, for .done file ... The *.bai.done file for the .bai file was written in the run directory instead of in the specified output directory. Changing getName() to getAbsolutePath() fixes this. Signed-off-by: Joel Thibault <thibault@broadinstitute.org>		2012-10-09 16:25:18 -04:00
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qscript/org/broadinstitute/sting/queue/qscripts	Update from dbsnp135 to dbsnp137.	2012-08-31 14:06:29 -04:00
src/org/broadinstitute/sting/queue	Fixed SortSam bug, for .done file	2012-10-09 16:25:18 -04:00
test/org/broadinstitute/sting/queue	Update DataProcessingPipelineTest MD5s	2012-09-24 15:38:07 -04:00