asivache e95f427965 Added isReference() to AllelicVariant and updated rodDbSNP accordingly ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@311 348d0f76-0448-11de-a6fe-93d51630548a		2009-04-07 14:49:20 +00:00
..
gatk	Added isReference() to AllelicVariant and updated rodDbSNP accordingly	2009-04-07 14:49:20 +00:00
playground	Math correction.	2009-04-07 02:18:13 +00:00
utils	Another check to deal with bad reads (BWA output throws bad exceptions)	2009-04-06 04:58:22 +00:00
StingException.java	We need a base exception so we can differentiate between exceptions we've generated and those external to our code. All our exceptions should extend this exception. I'll migrate the ones I can find later on.	2009-04-07 00:13:45 +00:00