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gatk-3.8/public/java/test/org/broadinstitute/sting
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Christopher Hartl 5d706c9e92 Merge branch 'master' of ssh://chartl@tin.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable 
Removing PSP and CSM

Conflicts:

	public/java/src/org/broadinstitute/sting/gatk/walkers/sequenom/CreateSequenomMask.java
	public/java/src/org/broadinstitute/sting/gatk/walkers/sequenom/PickSequenomProbes.java
 		2011-07-19 20:25:33 -04:00
..
alignment BWA bindings and tests moved to public (was required for ValidationAmplicons) 2011-07-19 20:11:31 -04:00
commandline Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
gatk Merge branch 'master' of ssh://chartl@tin.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable 2011-07-19 20:25:33 -04:00
jna Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
pipeline Cleanup of the utils.broad package. 2011-07-01 20:47:03 -04:00
utils Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00
BaseTest.java Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00
MD5DB.java Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00
StingTextReporter.java Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
WalkerTest.java Walker test system refactoring. All MD5DB related functions are now in MD5DB.java. 2011-07-18 10:46:01 -04:00