depristo e8d544869d Alignment context now supports the idea of skipped bases -- not currently in use ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1598 348d0f76-0448-11de-a6fe-93d51630548a		2009-09-12 19:11:38 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src/org/broadinstitute/sting	Alignment context now supports the idea of skipped bases -- not currently in use	2009-09-12 19:11:38 +00:00
test/org/broadinstitute/sting	General purpose merging iterator implementation	2009-09-12 19:06:15 +00:00