depristo e7eae9b61d High performance, correct implementation of -XL exclusion lists. Enjoy. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2994 348d0f76-0448-11de-a6fe-93d51630548a		2010-03-12 22:39:20 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	High performance, correct implementation of -XL exclusion lists. Enjoy.	2010-03-12 22:39:20 +00:00
test/org/broadinstitute/sting	removed the dependence on removeRegion() in GenomeLocSortedSet	2010-03-12 22:35:49 +00:00