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VectorPairHMM
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Removed g_haplotype* global variables in native code so that it works
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2014-03-06 22:08:35 -08:00 |
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c
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At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.
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2012-01-17 14:47:53 -05:00 |
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chainFiles
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…
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doc
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Fixed issues raised by Appistry QA (mostly small fixes, corrections & clarifications to GATKDocs)
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2013-03-12 10:57:14 -04:00 |
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external-example
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Fixed mvn run for packagetests over external-example.
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2014-02-22 01:21:34 +08:00 |
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gatk-framework
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Merge branch 'intel_pairhmm' of /data/broad/gsa-unstable into intel_pairhmm
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2014-03-05 09:35:50 -08:00 |
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gatk-package
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Fixed scope for test-jar depedencies.
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2014-02-22 01:21:34 +08:00 |
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gatk-queue-extgen
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Bumped version to 2.8-SNAPSHOT, using new update_pom_versions.sh script.
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2014-02-03 13:50:46 -05:00 |
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gsalib
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Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.
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2014-02-06 08:25:38 -05:00 |
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java/config
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Moved files to maven directories.
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2014-02-03 13:50:44 -05:00 |
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package-tests
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Separate failsafe directories for each of the integration test types [#66515572]
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2014-02-27 04:43:39 +08:00 |
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perl
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Fixing the liftover script to not require strict VCF header validation.
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2013-11-07 09:02:17 -05:00 |
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queue-framework
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Added tests for cleaning up scattered .bai files, and using the log directory.
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2014-02-26 02:11:28 +08:00 |
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queue-package
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Fixed scope for test-jar depedencies.
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2014-02-22 01:21:34 +08:00 |
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repo
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Replaced local drmaa and Jama artifacts with versions from maven central.
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2014-02-22 01:21:35 +08:00 |
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sting-root
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Added vectorized PairHMM implementation by Mohammad and Mustafa into the Maven build of GATK.
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2014-03-05 09:30:29 -08:00 |
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sting-utils
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Removed g_haplotype* global variables in native code so that it works
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2014-03-06 22:08:35 -08:00 |
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pom.xml
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Adding the external example to the build.
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2014-02-15 01:26:07 +08:00 |
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