Ami Levy-Moonshine 99cb8d68e9 Merge branch 'master' of github.com:broadinstitute/gsa-unstable		2013-01-25 16:07:38 -05:00
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sting	Add contract to ensure that getAdapterBoundary returns the right result	2013-01-25 16:05:17 -05:00
variant	In cases where one uses VariantContextUtils.GenotypeMergeType.REQUIRE_UNIQUE we used to verify that the samples names are unique in VariantContextUtils.simpleMerge for each VCs. It couse to a bug that was reported on the forum (when a VCs had 2 VC from the same sample).	2013-01-25 15:49:51 -05:00