Mark DePristo e73406b9b5 CountReadsInActiveRegions now emits a detailed GATK report ... -- This report details which intervals are coming in and how many reads they contain -- Added integration test to verify that the intervals aren't changing, before heading into the ART refactor		2012-03-14 17:26:37 -04:00
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R	GATKReport v1.0	2012-03-12 23:09:19 -04:00
c	At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.	2012-01-17 14:47:53 -05:00
chainFiles	…
doc	…
java	CountReadsInActiveRegions now emits a detailed GATK report	2012-03-14 17:26:37 -04:00
keys	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
packages	Public-key authorization scheme to restrict use of NO_ET	2012-03-06 00:09:43 -05:00
perl	Update to the bindings for liftOverVCF.pl (to -V from -B)	2011-09-15 15:33:09 -04:00
scala	Merge branch 'master' of ssh://gsa1.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable	2012-03-13 09:28:16 -04:00
testdata	analyzeRunReports cleanup for new minimal GATKRunReport structure	2012-03-12 09:46:26 -04:00