gatk3的最后一个经典版本3.8

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Ami Levy-Moonshine e6ef37de1d Add an option to filter the read bases that are taking into account for the coveraged intervals. For that, new two arguments were added: minBaseQuality and minMappingQuality		2013-11-18 17:29:32 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Add an option to filter the read bases that are taking into account for the coveraged intervals. For that, new two arguments were added: minBaseQuality and minMappingQuality	2013-11-18 17:29:32 -05:00
public	Rewrite ReadLengthDistribution to count the read lengths into a hash table first and only at the end to produce a GATK report table.	2013-11-18 17:29:31 -05:00
settings	Modify gatkdoc template to handle downsampling info better	2013-09-26 14:50:32 -04:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit