carneiro e5cfc6ae74 NA12878 hg19 dataset was included to the methods pipeline. (and I am running it) ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5217 348d0f76-0448-11de-a6fe-93d51630548a		2011-02-08 16:17:46 +00:00
..
chartl	Fixing import GenotypeCalculationModel since it doesn't exist anymore.	2011-02-02 15:39:43 +00:00
delangel	Script for calling indels in all phase 1 samples - VQSR part still needs work but raw calling is done	2011-01-22 14:07:10 +00:00
depristo	Removing unused class	2011-02-04 22:22:28 +00:00
fromer	Added queue/util/BAMutilities Object [with BAM and VCF parsing utilities], which is now used by my qscripts that robustly split runs by sample	2011-02-07 22:17:29 +00:00
hanna	Refactoring the qscript directory; oneoffs, playground, and core	2011-01-19 15:23:40 +00:00
kshakir	Refactoring the qscript directory; oneoffs, playground, and core	2011-01-19 15:23:40 +00:00
rpoplin	NA12878 hg19 dataset was included to the methods pipeline. (and I am running it)	2011-02-08 16:17:46 +00:00
QTools.q	Bug fixes in the in process function (spoiled by python: was not closing my writers). SortByRef now works somewhat like the perl script does, rather than doing a memory-expensive sort. Adding a QTools qscript which is kinda clunky, and will be used mostly for integration tests of these IPFs, pending some better way to construct argument collections and function accessors at compile-time.	2011-02-03 17:32:46 +00:00