gatk3的最后一个经典版本3.8

Mark DePristo e504806b91 GATKRunReport paranoid unit testing continues: now ensure that the public GATK cannot list buckets, objects, or delete them ... -- This is a good idea in case the key that's provided to the GATK doesn't have an appropriately restrictive access policy, and could actually delete objects, or list the bucket(s). With this unit test we know that the public distributed key cannot do too much damage		2013-02-03 14:01:09 -05:00
licensing	Refrain from pushing symlinks into the repo... not all filesystems treat it correctly	2013-01-22 15:18:19 -07:00
protected/java	- Added more comprehensive tests for consensus creation to RR. Still need to add tests for I/D ops.	2013-02-01 15:37:19 -05:00
public	GATKRunReport now tracks the errorMessage and errorThrown during post for later analysis	2013-02-02 19:24:31 -05:00
settings	Rev picard, sam-jdk, and tribble	2013-02-01 13:51:30 -05:00
.gitignore	Fixing the licensing scripts	2013-01-26 13:42:49 -05:00
build.xml	Move AWS keys to a resources subdirectory within the phonehome package	2013-01-31 11:56:34 -05:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	ReadBackedPileup cleanup	2013-01-11 15:17:18 -05:00