Guillermo del Angel 5be7e0621d Merge branch 'master' of ssh://gsa4.broadinstitute.org/humgen/gsa-scr1/gsa-engineering/git/unstable		2012-08-09 09:58:34 -04:00
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bqsr	Smoothing in the BQSR bins should be one error observation and one non-error observation.	2012-07-26 13:59:02 -04:00
compression/reducereads	Fixing ReduceReads downsampling bug -- downsampled reads were not being excluded from the read window, causing them to trail back and get caught by the sliding window exception	2012-08-08 15:49:31 -04:00
genotyper	Rename per-sample ML allelic fractions and counts so that they don't have the same name as the per-site INFO fields, and clarify wording in VCF header	2012-08-09 09:58:20 -04:00
haplotypecaller	Updating HaplotypeCaller integration tests	2012-08-06 12:02:19 -04:00