Eric Banks e47a389b26 Merge branch 'master' of github.com:broadinstitute/gsa-unstable		2013-01-16 14:59:11 -05:00
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src/org/broadinstitute/sting	Merge branch 'master' of github.com:broadinstitute/gsa-unstable	2013-01-16 14:59:11 -05:00
test/org/broadinstitute/sting	Added tests for changing IUPAC bases to Ns, for failing on bad ref bases, and for the HaplotypeCaller not failing when running over a region with an IUPAC base.	2013-01-16 14:55:33 -05:00