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gatk-3.8/public/java/test/org/broadinstitute/sting
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Mark DePristo e445c71161 LIBS optimization for adapter clipping 
-- GATKSAMRecords now cache the result of the getAdapterBoundary, allowing us to avoid repeating a lot of work in LIBS
-- Added unittests to cover adapter clipping
 		2013-01-25 16:05:17 -05:00
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commandline Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
gatk Working version of incremental active region traversals 2013-01-23 13:46:00 -05:00
jna Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
utils LIBS optimization for adapter clipping 2013-01-25 16:05:17 -05:00
AutoFormattingTimeUnitTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
BaseTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
MD5DB.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
MD5Mismatch.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
StingTextReporter.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
TestNGTestTransformer.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00
WalkerTest.java Updated all JAVA file licenses accordingly 2013-01-10 17:06:41 -05:00