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gatk-3.8/protected/gatk-tools-protected/src
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vruano e3d5d96076 Added the AF indepdent calculator for any ploidy but seems that is not doing a good job for haploid 
Addresses issue #1078 by implementing a any-ploidy version of the independent-allele-exact-ac-calculator already available for diploids.

Notice that this will change result somewhat when dealing with noisy data (low GQs).
 		2015-11-07 16:17:30 -05:00
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main Added the AF indepdent calculator for any ploidy but seems that is not doing a good job for haploid 2015-11-07 16:17:30 -05:00
test/java/org/broadinstitute/gatk Added the AF indepdent calculator for any ploidy but seems that is not doing a good job for haploid 2015-11-07 16:17:30 -05:00