gatk3的最后一个经典版本3.8

Eric Banks e370030e6c As requested by Mark, I've broken out the code to pull out the protected subclass when available (and otherwise use the public version) into the GATKLiteUtils class. People should use this code instead of reimplementing all of the java reflection on their own.		2012-07-18 22:44:37 -04:00
licensing	Finalizing GATK2 license text	2012-07-18 16:07:47 -04:00
protected/java	Move BQSR integration test and its dependent files into public; previously there was a protected->private dependency.	2012-07-18 21:11:33 -04:00
public	As requested by Mark, I've broken out the code to pull out the protected subclass when available (and otherwise use the public version) into the GATKLiteUtils class. People should use this code instead of reimplementing all of the java reflection on their own.	2012-07-18 22:44:37 -04:00
settings	Rev tribble to 110. Log is:	2012-06-26 15:28:32 -04:00
.gitignore	Minor additions to the shared .gitignore file, now that Mark has checked one in.	2011-10-26 12:24:28 -04:00
build.xml	Change committest target to allow inheritance of properties	2012-07-18 12:45:51 -04:00
ivy.xml	Navel -> GXDB	2012-06-28 13:38:00 -04:00