delangel e24f7fec47 Fixed indel genotyper which broke yet again because we can't just call context.getBasePileup() without checking again for its existence in the first place. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4553 348d0f76-0448-11de-a6fe-93d51630548a		2010-10-22 15:17:11 +00:00
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config	Provide a default logger, some config settings, and some doc updates.	2009-04-29 02:06:05 +00:00
src	Fixed indel genotyper which broke yet again because we can't just call context.getBasePileup() without checking again for its existence in the first place.	2010-10-22 15:17:11 +00:00
test	Fixed Integration Tests to output VCF files with -NO_HEADER	2010-10-21 19:49:44 +00:00