kshakir 0e3c76ab84 GSA-333 Meant to use getAbsolutePath and not deref symlinks. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3449 348d0f76-0448-11de-a6fe-93d51630548a		2010-05-27 21:23:02 +00:00
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org/broadinstitute/sting/queue	GSA-333 Meant to use getAbsolutePath and not deref symlinks.	2010-05-27 21:23:02 +00:00
BaseTransitionTableCalculator.scala	Scala walkers can now be build and run like any other walker in the GATK. Added the getUrlsForClasspath to PackageUtils, the Reflections package isn't getting the manifest files from jars in the classpath, and so we weren't seeing any walkers outside of the GenomeAnalysisTK.jar.	2009-11-02 06:02:41 +00:00
HelloWorld.scala	support for scala walkers	2009-08-28 00:15:01 +00:00
ScalaCountLoci.scala	Scala walkers can now be build and run like any other walker in the GATK. Added the getUrlsForClasspath to PackageUtils, the Reflections package isn't getting the manifest files from jars in the classpath, and so we weren't seeing any walkers outside of the GenomeAnalysisTK.jar.	2009-11-02 06:02:41 +00:00