Mauricio Carneiro e12ffb6547 Updating docs for GCContentByInterval ... This walker does not take any BAMs. It only walks over the reference.		2011-10-13 13:27:00 -04:00
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config	Reorganized the codebase beneath top-level public and private directories,	2011-06-28 06:55:19 -04:00
src	Updating docs for GCContentByInterval	2011-10-13 13:27:00 -04:00
test	Adding ability to exclude annotations from the VA and UG lists. As described in the docs, this argument trumps all others (including -all) so that we can get around the SnpEff issue brought up by Menachem. Added integration test for it.	2011-10-12 15:44:54 -04:00