gatk3的最后一个经典版本3.8

David Roazen e077347cc2 Re-allow running the GATK with experimental downsampling ... It's now possible to run with experimental downsampling enabled using the --enable_experimental_downsampling engine argument. This is scheduled to become the GATK-wide default next week after diff engine output for failing tests has been examined.		2012-09-21 23:20:46 -04:00
licensing	Revert unintentional license change	2012-08-09 17:10:47 -04:00
protected/java	Turn off RR tests while I debug	2012-09-21 17:26:00 -04:00
public	Re-allow running the GATK with experimental downsampling	2012-09-21 23:20:46 -04:00
settings	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00
.gitignore	a few more useful git ignores	2012-09-01 11:08:36 -04:00
build.xml	Proper error handling in NanoScheduler	2012-09-19 17:03:13 -04:00
ivy.xml	Updating cofoja to the latest version	2012-08-09 16:36:18 -04:00