gatk-3.8/public/java
Mark DePristo e01258b261 NanoScheduler now supports printProgress. Bugfixes to printProgress
-- TraverseReadsNano prints progress at the end of each traversal unit
-- Fix bugs in TraversalEngine printProgress
    -- Synchronize the method so we don't get multiple logged outputs when two or more HMSs call printProgress before initialization at the start!
    -- Fix the logic for mustPrint, which actually had the logic of mustNotPrint.  Now we see the done log line that was always supposed to be there
    -- Fix output formatting, as the done() line was incorrectly shifting over the % complete by 1 char as 100.0% didn't fit in %4.1f
-- Add clearer doc on -PF argument so that people know that the performance log can be generated to standard out if one wants
2012-09-05 15:45:23 -04:00
..
config Reorganized the codebase beneath top-level public and private directories, 2011-06-28 06:55:19 -04:00
src NanoScheduler now supports printProgress. Bugfixes to printProgress 2012-09-05 15:45:23 -04:00
test NanoScheduler no longer groups inputs, each map() call is interlaced now 2012-09-05 15:45:22 -04:00