kshakir 542d394e09 Cleaning up Queue debugging output. ... -l DEBUG with local programs now prints out the stdout/stderr of the programs as they are run. More documentation in the examples with a new even simpler CountReads example. Took out unused option to build Queue GATK extensions separately. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4025 348d0f76-0448-11de-a6fe-93d51630548a		2010-08-13 15:54:08 +00:00
..
depristo	1kg script now works	2010-08-10 12:01:18 +00:00
examples	Cleaning up Queue debugging output.	2010-08-13 15:54:08 +00:00
rpoplin	Changed logging level to default at INFO instead of WARN.	2010-08-09 16:42:48 +00:00
fullCallingPipeline.q	Changed logging level to default at INFO instead of WARN.	2010-08-09 16:42:48 +00:00
recalibrate.scala	full path to Rscript	2010-08-10 12:02:38 +00:00