gatk3的最后一个经典版本3.8

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Eric Banks df6499e58c Bug fix for RR: stop (incorrectly) pulling the MQ out of the SAMRecord as a byte instead of an int. For reads with high MQs (greater than max byte) the MQ was being treated as negative and failing the min MQ filter. Added unit test. Delivers PT#61567540.		2013-11-27 18:55:03 -05:00
licensing	deleted old license files	2013-07-02 16:36:47 -04:00
protected	Bug fix for RR: stop (incorrectly) pulling the MQ out of the SAMRecord as a byte instead of an int.	2013-11-27 18:55:03 -05:00
public	Introducing the latest-and-greatest in genotyping: CalculatePosteriors.	2013-11-27 13:00:45 -05:00
settings	Tweaked gatkdocs index template	2013-11-19 15:05:41 -05:00
.gitignore	Detect stuck lock-acquisition calls, and disable file locking for tests	2013-04-24 22:49:02 -04:00
README.md	Update README file for the 2.6 release	2013-06-20 13:08:29 -04:00
build.xml	Resolving warnings	2013-09-23 12:42:22 -04:00
intellij_example.tar.bz2	Removed the intellij files from the root and made an example package for new users. This allows users to start at the same page and then change it as they see fit without interfering with the repo (thanks guillermo!)	2012-09-27 11:04:56 -04:00
ivy.xml	Changing from scala 2.9.2 to 2.10.2.	2013-09-23 12:42:22 -04:00

The Genome Analysis Toolkit