Mark DePristo dee51c4189 Error out when NCT and BAMOUT are used with the HaplotypeCaller ... -- Currently we don't support writing a BAM file from the haplotype caller when nct is enabled. Check in initialize if this is the case, and throw a UserException		2013-06-21 09:25:57 -04:00
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src/org/broadinstitute/sting	Error out when NCT and BAMOUT are used with the HaplotypeCaller	2013-06-21 09:25:57 -04:00
test/org/broadinstitute/sting	Better GATK version and command line output	2013-06-20 11:19:13 -04:00