Eric Banks a623cca89a Bug fix for HaplotypeCaller, as reported on the forum: when reduced reads didn't completely overlap a deletion call, ... we were incorrectly trying to find the reference position of a base on the read that didn't exist. Added integration test to cover this case.		2013-01-16 22:47:58 -05:00
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broadinstitute/sting	Bug fix for HaplotypeCaller, as reported on the forum: when reduced reads didn't completely overlap a deletion call,	2013-01-16 22:47:58 -05:00